BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038C03SP1|AL430506
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1663 942 0.0
3x_Contig1091 817 0.0
3x_Contig555 419 e-117
>3x_Contig1663
Length = 13533
Score = 942 bits (475), Expect = 0.0
Identities = 475/475 (100%)
Strand = Plus / Minus
Query: 425 attgtttggctgaggctggaaatttgggtttgtttccggtacaagtgcggtcgttaactt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13532 attgtttggctgaggctggaaatttgggtttgtttccggtacaagtgcggtcgttaactt 13473
Query: 485 gttgatttgattcaagtttgttagcctatctgtgttggaatcattgtcgatgcttagctg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13472 gttgatttgattcaagtttgttagcctatctgtgttggaatcattgtcgatgcttagctg 13413
Query: 545 cttattgttactatcgtactgaatcatggttttgtttttagcagttataggaactggtgg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13412 cttattgttactatcgtactgaatcatggttttgtttttagcagttataggaactggtgg 13353
Query: 605 tgtagctcctgtactctggcccatattgattcttgttgaacatgttaagtcaaaacagct 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13352 tgtagctcctgtactctggcccatattgattcttgttgaacatgttaagtcaaaacagct 13293
Query: 665 tttgtattttcgagataaagaaatatagatactgagaatggtgctatggataaaaaataa 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13292 tttgtattttcgagataaagaaatatagatactgagaatggtgctatggataaaaaataa 13233
Query: 725 atgaccagggaaatagtatcagaagcaccaaaatcaccagtgatagtataatttacttga 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13232 atgaccagggaaatagtatcagaagcaccaaaatcaccagtgatagtataatttacttga 13173
Query: 785 cagcttagatttgaaaatagtaatactgtaaacagcaattttttccttgcttagaacacc 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13172 cagcttagatttgaaaatagtaatactgtaaacagcaattttttccttgcttagaacacc 13113
Query: 845 tggcgtgcaatggagagccactttaaggttgatattcaaaccatctaaggagaag 899
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13112 tggcgtgcaatggagagccactttaaggttgatattcaaaccatctaaggagaag 13058
>3x_Contig1091
Length = 4701
Score = 817 bits (412), Expect = 0.0
Identities = 419/422 (99%)
Strand = Plus / Plus
Query: 1 gatcaccctcaatttcgagcattttcttttcacaggcttggaaaagtgcaagtaaaggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4280 gatcaccctcaatttcgagcattttcttttcacaggcttggaaaagtgcaagtaaaggtc 4339
Query: 61 cattctttgggtctaatgaaagacctctttcacagtaaggtctcgccaattccactagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4340 cattctttgggtctaatgaaagacctctttcacagtaaggtctcgccaattccactagat 4399
Query: 121 ttagcttaagtaaacaatccgttaaccttataaacacttctggcaccaccataccacagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4400 ttagcttaagtaaacaatccgttaaccttataaacacttctggcaccaccataccacagt 4459
Query: 181 tgagaagcatctcaagatcttgccatgcatctagattacgctgtgaaaccaattcaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4460 tgagaagcatctcaagatcttgccatgcatctagattacgctgtgaaaccaattcaagat 4519
Query: 241 ctgttctgttacgtaacatcatgtgtagctcttgaagttgaaaagaaaatggttcccatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4520 ctgttctgttacgtaacatcatgtgtagctcttgaagttgaaaagaaaatggttcccatg 4579
Query: 301 gtttacgagccttattacgcatatcgacagcvaggtcgacttttctgagagcatctggta 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 4580 gtttacgagccttattacgcatatcgacagcaaggtcgacttttctgagagcatctggta 4639
Query: 361 tattcttgttctgtgcttgttgcatgccggattgaaacatatttttgaccatgtttgttg 420
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 4640 tattcttgttctgtgcttgttgcatgccggattgaaacatatgttggaccatgtttgttg 4699
Query: 421 tt 422
||
Sbjct: 4700 tt 4701
>3x_Contig555
Length = 1912
Score = 419 bits (211), Expect = e-117
Identities = 425/497 (85%)
Strand = Plus / Plus
Query: 9 tcaatttcgagcattttcttttcacaggcttggaaaagtgcaagtaaaggtccattcttt 68
|||||||| |||||||||||||| ||| | ||||| || |||||| | |||| ||
Sbjct: 322 tcaatttcaagcattttcttttcgcagatcttgaaaaatgtaagtaactgggcatttttg 381
Query: 69 gggtctaatgaaagacctctttcacagtaaggtctcgccaattccactagatttagctta 128
||||| |||||||| |||||||||||||| | | | |||||||| || |||||||||||
Sbjct: 382 gggtcgaatgaaagtcctctttcacagtatgttattgccaattctaccagatttagcttg 441
Query: 129 agtaaacaatccgttaaccttataaacacttctggcaccaccataccacagttgagaagc 188
| | |||||| | |||||| | ||| |||||||| || ||||||||| |||||||||
Sbjct: 442 ataagacaatctgctaacctcaaaaatacttctgggacagtcataccacaattgagaagc 501
Query: 189 atctcaagatcttgccatgcatctagattacgctgtgaaaccaattcaagatctgttctg 248
|| |||||||||||||||||||||| ||| || ||||| || |||||||||||| |||||
Sbjct: 502 atttcaagatcttgccatgcatctacatttcgttgtgagactaattcaagatctattctg 561
Query: 249 ttacgtaacatcatgtgtagctcttgaagttgaaaagaaaatggttcccatggtttacga 308
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 562 ttacgtaacatcatgtgtagctcttgaagttgaaaagtaaatggttctcatggtttacga 621
Query: 309 gccttattacgcatatcgacagcvaggtcgacttttctgagagcatctggtatattcttg 368
||||||||||||||||||| ||| ||| |||||||| | |||||||||||||| ||||||
Sbjct: 622 gccttattacgcatatcgatagcaaggccgactttttttagagcatctggtatgttcttg 681
Query: 369 ttctgtgcttgttgcatgccggattgaaacatatttttgaccatgtttgttgtttcattg 428
|||||||| || | ||| || |||||||||||||| || ||||| || || |||||||||
Sbjct: 682 ttctgtgcctgcttcataccagattgaaacatattctttaccatattcgtcgtttcattg 741
Query: 429 tttggctgaggctggaaatttgggtttgtttccggtacaagtgcggtcgttaacttgttg 488
| || ||||| ||||||||||| |||||||| | || || || |||||||||||||||
Sbjct: 742 tccggttgaggttggaaatttggatttgtttctgaaactagcgctgtcgttaacttgttg 801
Query: 489 atttgattcaagtttgt 505
|||||||||||||||||
Sbjct: 802 atttgattcaagtttgt 818
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7503
Number of Sequences: 1807
Number of extensions: 7503
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 3
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)